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Tech startup accountant in Toronto

A Toronto software company usually has three money questions at once: how to claim its development work, how to pay founders who are still building, and how to keep equity promises from turning into tax surprises. The books have to answer all three.

EverStone is a remote CPA serving Toronto founders, and the Toronto small business accountant page covers the wider Ontario picture. Fixed fees, online.

Quick answer: A Toronto tech startup that is a Canadian-controlled private corporation can claim SR&ED on Form T661 and may earn the enhanced refundable credit. Grants and other government help usually reduce the spending the credit is based on. Options granted by a CCPC are generally taxed when the shares are sold, not when the option is exercised. EverStone prepares the claim, the T2 and the HST filings remotely. Published fees start at $300 a month for bookkeeping and $100 for a personal return.

If you are still deciding whether to incorporate, start with should I incorporate. If the company exists and has a first year-end coming, the just-incorporated checklist lists what to set up before the first return.

SR&ED starts in the bookkeeping, not the claim

The Scientific Research and Experimental Development program is claimed on Form T661 with the corporate return. The claim describes technological uncertainty and the systematic work done to resolve it. It also has to put a number on the salaries, contractor costs and materials behind that work. That second half is where Toronto startups lose money.

If developers log time against features and experiments during the year, the eligible wages can be traced. If nobody does, the claim is rebuilt from memory eighteen months later and trimmed to what can be defended. A CCPC can earn an enhanced refundable credit, which means cash back even in a year with no taxable profit. For a company burning runway, that refund is often the most valuable line on the T2. Ontario layers its own research credits on the same work, so one clean set of records supports both. See the SR&ED expenditure limit update.

Grants, the SR&ED base and the order of operations

Toronto founders often stack funding: a government grant, an accelerator award, a research partnership and then SR&ED on top. The rule to know is simple. Government and non-government assistance for the same work generally reduces the expenditures the SR&ED credit is calculated on. A grant does not disqualify the project, but it shrinks the base.

So each grant needs its own tag in the books, tied to the project and period it paid for. Record it as general revenue and the claim overstates the base. Leave it off entirely and the reviewer finds it. Neither mistake is rare, and both are avoided by coding assistance when the money arrives.

Founders’ pay while the company has no profit

Early on, founders often pay themselves nothing and lend the company money instead. Later they draw salary, dividends or a mix. The choice matters more in a research company than elsewhere. Salary paid to a founder who works on qualifying development can count as an SR&ED wage. A dividend cannot. Salary also creates RRSP room and CPP, and it runs through payroll with remittances and a T4 due by the last day of February.

Money moving the other way needs care too. A shareholder loan that is not repaid within one year after the corporation’s year-end is generally taxed as the owner’s income. Track every advance and every reimbursement on a shareholder loan schedule. The salary-versus-dividends calculator is a useful first pass.

Stock options in a CCPC

Equity is how a Toronto startup competes for engineers before it can compete on salary. For a Canadian-controlled private corporation, the tax on an employee stock option benefit is generally deferred until the shares are sold, not triggered at exercise. That is friendlier than the public-company rule, but it still needs paperwork. Grants, vesting, exercises and the price paid have to be recorded, and the benefit reported on the T4 in the year of sale.

Option plans also collide with the SR&ED claim. The option benefit is not a cash wage and is not treated as one in the claim. Keep the cap table and the payroll records reconciled, because an acquirer or investor will ask for both.

HST on software sold from Toronto

Ontario charges a single 13% HST. For a startup, the harder question is who the customer is. Subscriptions sold to Ontario businesses carry 13%. Sales to customers in other provinces follow their rate. Services and intangibles supplied to non-residents are often zero-rated. A company selling through a payment platform to customers in a dozen countries needs its billing system set up to show where each customer is. Registration is mandatory once taxable sales pass $30,000 in four consecutive quarters. Many startups register earlier, because recovering HST on development spend helps cash while revenue is small. Ontario also has an Employer Health Tax once payroll passes the exemption; the Toronto payroll page covers it.

What EverStone handles for you

One CPA, one fixed fee agreed up front:

  • T2 corporate return with the SR&ED schedules and Form T661
  • Development time and cost tracking set up in the books
  • Grant and assistance tracking by project
  • Founder salary, dividend and shareholder loan planning
  • Stock option records and T4 reporting on sale
  • HST registration, place-of-supply and filings
  • Board and investor reporting from the monthly close

Fixed fees, fully online

EverStone is an Abbotsford CPA firm serving Toronto founders entirely online: video calls, a secure upload link and e-signature. We are three hours behind Toronto, so something sent at the end of your day is usually answered before your next stand-up. Monthly bookkeeping starts from $300 a month with HST filing included, and a fractional CFO engagement starts from $2,500 a month once the company is raising. The T2 and SR&ED work are quoted after a free consultation. See what it costs.

About this article
EverStone CPA

Prepared and reviewed by a Chartered Professional Accountant at EverStone CPA, an Abbotsford CPA firm working with small businesses and incorporated owners across the Fraser Valley and Canada. Updated September 2026. About the firm  ·  Book a free consult

What a tech startup has to get right

What a tech startup has to get right The items that decide a startup’s year-end — for a business operating in Toronto, Ontario
ItemWhy it matters
Development timeTime records are what turn salaries into an SR&ED claim
Grants and assistanceAssistance for the same work generally reduces the SR&ED base
Founder paySalary can be a qualifying wage; a dividend cannot
Stock optionsA CCPC option benefit is generally taxed when the shares are sold
Sales tax where you operate13% HST, a single registration and a single return

Source: Corporate tax hub. General information, not advice.

Other services for Toronto businesses: personal tax.

Common questions

Toronto accounting for tech startups FAQ

Can a pre-revenue Toronto startup get money back from SR&ED?+
Often, yes. A Canadian-controlled private corporation can earn an enhanced refundable credit, so a qualifying claim can produce a refund even in a loss year. The claim is only as good as the records behind it, so time tracking and cost coding need to start during the year, not at filing. Ask about your case →
Does a government grant stop us claiming SR&ED?+
No, but it usually reduces the expenditures the credit is calculated on. Record each grant against the project and period it funded so the claim uses the right base.
Should founders take salary or dividends?+
It depends on the year. Salary paid for qualifying development work can count toward SR&ED, creates RRSP room and brings CPP. Dividends are simpler to administer but add nothing to the claim. Many founders use a mix and revisit it at each year-end.
When are employee stock options taxed in a CCPC?+
Generally when the shares are sold, not when the option is exercised. The benefit is reported on the employee’s T4 for the year of sale, so the company needs clean records of grant, exercise and price.
Do we charge HST to customers outside Ontario?+
It depends where the customer is. Other provinces use their own rate, and many supplies to non-residents are zero-rated. Set your billing system to capture customer location so each invoice carries the right tax.
Can a CPA in British Columbia handle a Toronto startup?+
Yes. Corporate tax and SR&ED are federal, with an Ontario layer handled on the same return. The work runs by video, secure upload and e-signature, and there is no Toronto office.
Do you work with businesses outside Toronto itself?+
Yes. Tech startups in Mississauga, Brampton, Vaughan, Markham and the rest of the GTA are served the same way as those in Toronto, remotely and at the same fixed fees.

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Remote startup accounting from Abbotsford

EverStone is a sole practitioner CPA firm based in Abbotsford, serving Toronto owners entirely online. There is no Toronto office and no local staff. Meetings are held by video or phone, documents come in through a secure upload link and are signed by e-signature, and no visit is required at any point. Development time, grant records and cap-table changes are kept in the same monthly file, because the SR&ED claim depends on all three.

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